Meta function, calling all filtering steps, in order. Only defaults.
filter_ndvi(DT)data.table of NDVI time series
filtered NDVI time series.
Other filter:
filter_qa(),
filter_roll(),
filter_top(),
filter_winter()
# Load data.table
library(data.table)
# Read example data
ndvi <- fread(system.file("extdata", "sampled-ndvi-MODIS-MOD13Q1.csv", package = "irg"))
# Use filter_ndvi to apply all filtering steps (with defaults)
filter_ndvi(ndvi)
#> id NDVI SummaryQA DayOfYear yr filtered winter rolled top
#> 1: 0 0.1864 3 11 2015 0.3076500 0.3076500 0.3076500 0.8735000
#> 2: 1 0.0541 2 3 2015 0.3163400 0.3163400 0.3163400 0.8632175
#> 3: 2 0.1781 3 11 2015 0.2649875 0.2649875 0.2649875 0.8707500
#> 4: 3 0.1024 2 5 2015 0.2301750 0.2301750 0.2301750 0.8635525
#> 5: 4 0.0898 2 3 2015 0.2177150 0.2177150 0.2177150 0.8476000
#> ---
#> 801: 2 0.1179 2 364 2019 0.2649875 0.2649875 0.2649875 0.8707500
#> 802: 3 0.0789 2 364 2019 0.2301750 0.2301750 0.2301750 0.8635525
#> 803: 4 0.1572 2 364 2019 0.2177150 0.2177150 0.2177150 0.8476000
#> 804: 5 0.0763 2 364 2019 0.3163400 0.3163400 0.3163400 0.8632175
#> 805: 6 0.1197 2 362 2019 0.3149325 0.3149325 0.3149325 0.8632000